GpuMemUtils.cpp File Reference

#include "DataMgr/Allocators/DeviceAllocator.h"
#include "GpuInitGroups.h"
#include "GpuMemUtils.h"
#include "Logger/Logger.h"
#include "StreamingTopN.h"
#include "../CudaMgr/CudaMgr.h"
#include "GroupByAndAggregate.h"

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Namespaces
	anonymous_namespace{GpuMemUtils.cpp}

Functions
void	copy_to_nvidia_gpu (Data_Namespace::DataMgr *data_mgr, CUdeviceptr dst, const void *src, const size_t num_bytes, const int device_id)
size_t	anonymous_namespace{GpuMemUtils.cpp}::coalesced_size (const QueryMemoryDescriptor &query_mem_desc, const size_t group_by_one_buffer_size, const unsigned grid_size_x)
GpuGroupByBuffers	create_dev_group_by_buffers (DeviceAllocator *device_allocator, const std::vector< int64_t * > &group_by_buffers, const QueryMemoryDescriptor &query_mem_desc, const unsigned block_size_x, const unsigned grid_size_x, const int device_id, const ExecutorDispatchMode dispatch_mode, const int64_t num_input_rows, const bool prepend_index_buffer, const bool always_init_group_by_on_host, const bool use_bump_allocator, const bool has_varlen_output, Allocator *insitu_allocator)
void	copy_group_by_buffers_from_gpu (DeviceAllocator &device_allocator, const std::vector< int64_t * > &group_by_buffers, const size_t groups_buffer_size, const int8_t *group_by_dev_buffers_mem, const QueryMemoryDescriptor &query_mem_desc, const unsigned block_size_x, const unsigned grid_size_x, const int device_id, const bool prepend_index_buffer, const bool has_varlen_output)
size_t	get_num_allocated_rows_from_gpu (DeviceAllocator &device_allocator, int8_t *projection_size_gpu, const int device_id)
void	copy_projection_buffer_from_gpu_columnar (Data_Namespace::DataMgr *data_mgr, const GpuGroupByBuffers &gpu_group_by_buffers, const QueryMemoryDescriptor &query_mem_desc, int8_t *projection_buffer, const size_t projection_count, const int device_id)

Variables
size_t	g_max_memory_allocation_size
size_t	g_min_memory_allocation_size
double	g_bump_allocator_step_reduction

Function Documentation

void copy_group_by_buffers_from_gpu	(	DeviceAllocator &	device_allocator,
		const std::vector< int64_t * > &	group_by_buffers,
		const size_t	groups_buffer_size,
		const int8_t *	group_by_dev_buffers_mem,
		const QueryMemoryDescriptor &	query_mem_desc,
		const unsigned	block_size_x,
		const unsigned	grid_size_x,
		const int	device_id,
		const bool	prepend_index_buffer,
		const bool	has_varlen_output
	)

Definition at line 228 of file GpuMemUtils.cpp.

References QueryMemoryDescriptor::blocksShareMemory(), CHECK_EQ, CHECK_LT, anonymous_namespace{GpuMemUtils.cpp}::coalesced_size(), DeviceAllocator::copyFromDevice(), and QueryMemoryDescriptor::getEntryCount().

Referenced by QueryMemoryInitializer::copyGroupByBuffersFromGpu(), and ResultSet::radixSortOnGpu().

                                                                  {
  if (group_by_buffers.empty()) {
    return;
  }
  const size_t first_group_buffer_idx = has_varlen_output ? 1 : 0;

  const unsigned block_buffer_count{query_mem_desc.blocksShareMemory() ? 1 : grid_size_x};
  if (block_buffer_count == 1 && !prepend_index_buffer) {
    CHECK_EQ(coalesced_size(query_mem_desc, groups_buffer_size, block_buffer_count),
             groups_buffer_size);
    device_allocator.copyFromDevice(group_by_buffers[first_group_buffer_idx],
                                    group_by_dev_buffers_mem,
                                    groups_buffer_size);
    return;
  }
  const size_t index_buffer_sz{
      prepend_index_buffer ? query_mem_desc.getEntryCount() * sizeof(int64_t) : 0};
  std::vector<int8_t> buff_from_gpu(
      coalesced_size(query_mem_desc, groups_buffer_size, block_buffer_count) +
      index_buffer_sz);
  device_allocator.copyFromDevice(&buff_from_gpu[0],
                                  group_by_dev_buffers_mem - index_buffer_sz,
                                  buff_from_gpu.size());
  auto buff_from_gpu_ptr = &buff_from_gpu[0];
  for (size_t i = 0; i < block_buffer_count; ++i) {
    const size_t buffer_idx = (i * block_size_x) + first_group_buffer_idx;
    CHECK_LT(buffer_idx, group_by_buffers.size());
    memcpy(group_by_buffers[buffer_idx],
           buff_from_gpu_ptr,
           groups_buffer_size + index_buffer_sz);
    buff_from_gpu_ptr += groups_buffer_size;
  }
}

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void copy_projection_buffer_from_gpu_columnar	(	Data_Namespace::DataMgr *	data_mgr,
		const GpuGroupByBuffers &	gpu_group_by_buffers,
		const QueryMemoryDescriptor &	query_mem_desc,
		int8_t *	projection_buffer,
		const size_t	projection_count,
		const int	device_id
	)

For projection queries we only copy back as many elements as necessary, not the whole output buffer. The goal is to be able to build a compact ResultSet, particularly useful for columnar outputs.

NOTE: Saman: we should revisit this function when we have a bump allocator

Definition at line 293 of file GpuMemUtils.cpp.

References align_to_int64(), CHECK, GpuGroupByBuffers::data, QueryMemoryDescriptor::didOutputColumnar(), QueryMemoryDescriptor::getColOffInBytes(), QueryMemoryDescriptor::getPaddedSlotWidthBytes(), QueryMemoryDescriptor::getQueryDescriptionType(), getQueryEngineCudaStreamForDevice(), QueryMemoryDescriptor::getSlotCount(), and heavyai::Projection.

Referenced by QueryMemoryInitializer::compactProjectionBuffersGpu().

                         {
#ifdef HAVE_CUDA
  CHECK(query_mem_desc.didOutputColumnar());
  CHECK(query_mem_desc.getQueryDescriptionType() == QueryDescriptionType::Projection);
  constexpr size_t row_index_width = sizeof(int64_t);

  auto allocator = std::make_unique<CudaAllocator>(
      data_mgr, device_id, getQueryEngineCudaStreamForDevice(device_id));
  // copy all the row indices back to the host
  allocator->copyFromDevice(
      projection_buffer, gpu_group_by_buffers.data, projection_count * row_index_width);
  size_t buffer_offset_cpu{projection_count * row_index_width};
  // other columns are actual non-lazy columns for the projection:
  for (size_t i = 0; i < query_mem_desc.getSlotCount(); i++) {
    if (query_mem_desc.getPaddedSlotWidthBytes(i) > 0) {
      const auto column_proj_size =
          projection_count * query_mem_desc.getPaddedSlotWidthBytes(i);
      allocator->copyFromDevice(
          projection_buffer + buffer_offset_cpu,
          gpu_group_by_buffers.data + query_mem_desc.getColOffInBytes(i),
          column_proj_size);
      buffer_offset_cpu += align_to_int64(column_proj_size);
    }
  }
#else
  CHECK(false);
#endif  // HAVE_CUDA
}

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void copy_to_nvidia_gpu	(	Data_Namespace::DataMgr *	data_mgr,
		CUdeviceptr	dst,
		const void *	src,
		const size_t	num_bytes,
		const int	device_id
	)

Definition at line 35 of file GpuMemUtils.cpp.

References CHECK, checkCudaErrors(), Data_Namespace::DataMgr::getCudaMgr(), and getQueryEngineCudaStreamForDevice().

Referenced by TreeModelPredictionMgr::createKernelBuffers(), StringDictionaryTranslationMgr::createKernelBuffers(), and anonymous_namespace{ResultSetSortImpl.cu}::get_device_copy_ptr().

                                             {
#ifdef HAVE_CUDA
  auto qe_cuda_stream = getQueryEngineCudaStreamForDevice(device_id);
  if (!data_mgr) {  // only for unit tests
    checkCudaErrors(cuMemcpyHtoDAsync(dst, src, num_bytes, qe_cuda_stream));
    checkCudaErrors(cuStreamSynchronize(qe_cuda_stream));
    return;
  }
  const auto cuda_mgr = data_mgr->getCudaMgr();
  CHECK(cuda_mgr);
  cuda_mgr->copyHostToDevice(reinterpret_cast<int8_t*>(dst),
                             static_cast<const int8_t*>(src),
                             num_bytes,
                             device_id,
                             qe_cuda_stream);
#else
  CHECK(false);
#endif  // HAVE_CUDA
}

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GpuGroupByBuffers create_dev_group_by_buffers	(	DeviceAllocator *	device_allocator,
		const std::vector< int64_t * > &	group_by_buffers,
		const QueryMemoryDescriptor &	query_mem_desc,
		const unsigned	block_size_x,
		const unsigned	grid_size_x,
		const int	device_id,
		const ExecutorDispatchMode	dispatch_mode,
		const int64_t	num_input_rows,
		const bool	prepend_index_buffer,
		const bool	always_init_group_by_on_host,
		const bool	use_bump_allocator,
		const bool	has_varlen_output,
		Allocator *	insitu_allocator
	)

Definition at line 70 of file GpuMemUtils.cpp.

References align_to_int64(), Allocator::alloc(), QueryMemoryDescriptor::blocksShareMemory(), CHECK, CHECK_GT, CHECK_LE, anonymous_namespace{GpuMemUtils.cpp}::coalesced_size(), DeviceAllocator::copyToDevice(), g_bump_allocator_step_reduction, g_max_memory_allocation_size, g_min_memory_allocation_size, QueryMemoryDescriptor::getBufferSizeBytes(), QueryMemoryDescriptor::getEntryCount(), QueryMemoryDescriptor::getRowSize(), GPU, logger::INFO, KernelPerFragment, QueryMemoryDescriptor::lazyInitGroups(), LOG, QueryMemoryDescriptor::threadsShareMemory(), to_string(), QueryMemoryDescriptor::varlenOutputBufferElemSize(), and logger::WARNING.

Referenced by QueryMemoryInitializer::createAndInitializeGroupByBufferGpu(), and ResultSet::radixSortOnGpu().

                                 {
  if (group_by_buffers.empty() && !insitu_allocator) {
    return {0, 0, 0, 0};
  }
  CHECK(device_allocator);

  size_t groups_buffer_size{0};
  int8_t* group_by_dev_buffers_mem{nullptr};
  size_t mem_size{0};
  size_t entry_count{0};

  if (use_bump_allocator) {
    CHECK(!prepend_index_buffer);
    CHECK(!insitu_allocator);

    if (dispatch_mode == ExecutorDispatchMode::KernelPerFragment) {
      // Allocate an output buffer equal to the size of the number of rows in the
      // fragment. The kernel per fragment path is only used for projections with lazy
      // fetched outputs. Therefore, the resulting output buffer should be relatively
      // narrow compared to the width of an input row, offsetting the larger allocation.

      CHECK_GT(num_input_rows, int64_t(0));
      entry_count = num_input_rows;
      groups_buffer_size =
          query_mem_desc.getBufferSizeBytes(ExecutorDeviceType::GPU, entry_count);
      mem_size = coalesced_size(query_mem_desc,
                                groups_buffer_size,
                                query_mem_desc.blocksShareMemory() ? 1 : grid_size_x);
      // TODO(adb): render allocator support
      group_by_dev_buffers_mem = device_allocator->alloc(mem_size);
    } else {
      // Attempt to allocate increasingly small buffers until we have less than 256B of
      // memory remaining on the device. This may have the side effect of evicting
      // memory allocated for previous queries. However, at current maximum slab sizes
      // (2GB) we expect these effects to be minimal.
      size_t max_memory_size{g_max_memory_allocation_size};
      while (true) {
        entry_count = max_memory_size / query_mem_desc.getRowSize();
        groups_buffer_size =
            query_mem_desc.getBufferSizeBytes(ExecutorDeviceType::GPU, entry_count);

        try {
          mem_size = coalesced_size(query_mem_desc,
                                    groups_buffer_size,
                                    query_mem_desc.blocksShareMemory() ? 1 : grid_size_x);
          CHECK_LE(entry_count, std::numeric_limits<uint32_t>::max());

          // TODO(adb): render allocator support
          group_by_dev_buffers_mem = device_allocator->alloc(mem_size);
        } catch (const OutOfMemory& e) {
          LOG(WARNING) << e.what();
          max_memory_size = max_memory_size * g_bump_allocator_step_reduction;
          if (max_memory_size < g_min_memory_allocation_size) {
            throw;
          }

          LOG(WARNING) << "Ran out of memory for projection query output. Retrying with "
                       << std::to_string(max_memory_size) << " bytes";

          continue;
        }
        break;
      }
    }
    LOG(INFO) << "Projection query allocation succeeded with " << groups_buffer_size
              << " bytes allocated (max entry count " << entry_count << ")";
  } else {
    entry_count = query_mem_desc.getEntryCount();
    CHECK_GT(entry_count, size_t(0));
    groups_buffer_size =
        query_mem_desc.getBufferSizeBytes(ExecutorDeviceType::GPU, entry_count);
    mem_size = coalesced_size(query_mem_desc,
                              groups_buffer_size,
                              query_mem_desc.blocksShareMemory() ? 1 : grid_size_x);
    const size_t prepended_buff_size{
        prepend_index_buffer ? align_to_int64(entry_count * sizeof(int32_t)) : 0};

    int8_t* group_by_dev_buffers_allocation{nullptr};
    if (insitu_allocator) {
      group_by_dev_buffers_allocation =
          insitu_allocator->alloc(mem_size + prepended_buff_size);
    } else {
      group_by_dev_buffers_allocation =
          device_allocator->alloc(mem_size + prepended_buff_size);
    }
    CHECK(group_by_dev_buffers_allocation);

    group_by_dev_buffers_mem = group_by_dev_buffers_allocation + prepended_buff_size;
  }
  CHECK_GT(groups_buffer_size, size_t(0));
  CHECK(group_by_dev_buffers_mem);

  CHECK(query_mem_desc.threadsShareMemory());
  const size_t step{block_size_x};

  if (!insitu_allocator && (always_init_group_by_on_host ||
                            !query_mem_desc.lazyInitGroups(ExecutorDeviceType::GPU))) {
    std::vector<int8_t> buff_to_gpu(mem_size);
    auto buff_to_gpu_ptr = buff_to_gpu.data();

    const size_t start = has_varlen_output ? 1 : 0;
    for (size_t i = start; i < group_by_buffers.size(); i += step) {
      memcpy(buff_to_gpu_ptr, group_by_buffers[i], groups_buffer_size);
      buff_to_gpu_ptr += groups_buffer_size;
    }
    device_allocator->copyToDevice(reinterpret_cast<int8_t*>(group_by_dev_buffers_mem),
                                   buff_to_gpu.data(),
                                   buff_to_gpu.size());
  }

  auto group_by_dev_buffer = group_by_dev_buffers_mem;

  const size_t num_ptrs =
      (block_size_x * grid_size_x) + (has_varlen_output ? size_t(1) : size_t(0));

  std::vector<int8_t*> group_by_dev_buffers(num_ptrs);

  const size_t start_index = has_varlen_output ? 1 : 0;
  for (size_t i = start_index; i < num_ptrs; i += step) {
    for (size_t j = 0; j < step; ++j) {
      group_by_dev_buffers[i + j] = group_by_dev_buffer;
    }
    if (!query_mem_desc.blocksShareMemory()) {
      group_by_dev_buffer += groups_buffer_size;
    }
  }

  int8_t* varlen_output_buffer{nullptr};
  if (has_varlen_output) {
    const auto varlen_buffer_elem_size_opt = query_mem_desc.varlenOutputBufferElemSize();
    CHECK(varlen_buffer_elem_size_opt);  // TODO(adb): relax

    group_by_dev_buffers[0] = device_allocator->alloc(
        query_mem_desc.getEntryCount() * varlen_buffer_elem_size_opt.value());
    varlen_output_buffer = group_by_dev_buffers[0];
  }

  auto group_by_dev_ptr = device_allocator->alloc(num_ptrs * sizeof(CUdeviceptr));
  device_allocator->copyToDevice(group_by_dev_ptr,
                                 reinterpret_cast<int8_t*>(group_by_dev_buffers.data()),
                                 num_ptrs * sizeof(CUdeviceptr));

  return {group_by_dev_ptr, group_by_dev_buffers_mem, entry_count, varlen_output_buffer};
}

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size_t get_num_allocated_rows_from_gpu	(	DeviceAllocator &	device_allocator,
		int8_t *	projection_size_gpu,
		const int	device_id
	)

Returns back total number of allocated rows per device (i.e., number of matched elements in projections).

TODO(Saman): revisit this for bump allocators

Definition at line 277 of file GpuMemUtils.cpp.

References CHECK, and DeviceAllocator::copyFromDevice().

Referenced by QueryExecutionContext::launchGpuCode().

                                                            {
  int32_t num_rows{0};
  device_allocator.copyFromDevice(&num_rows, projection_size_gpu, sizeof(num_rows));
  CHECK(num_rows >= 0);
  return static_cast<size_t>(num_rows);
}

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Variable Documentation

double g_bump_allocator_step_reduction

Definition at line 133 of file Execute.cpp.

size_t g_max_memory_allocation_size

Definition at line 128 of file Execute.cpp.

size_t g_min_memory_allocation_size

Definition at line 129 of file Execute.cpp.